Insertion junction: LMJ.RY0402.051379_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.051379
Chromosome:chromosome 5
Location:1659020
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g243050 TRX3,TRXf2,TRXF2 (1 of 1) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED; Thioredoxin f2, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGGCTACCGCCAAGGGCTACCGCCACG
Internal bar code:TCGGGCCAGGTGACGCCTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:96.1749
LEAP-Seq n confirming:2112
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGACAAGTGTTCCCCGGTC
Suggested primer 2:TTGAGCCACACCCACAATTA