Insertion junction: LMJ.RY0402.051513_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.051513
Chromosome:chromosome 4
Location:2074896
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g219150 (1 of 14) IPR006626//IPR011050 - Parallel beta-helix repeat // Pectin lyase fold/virulence factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCCGTATGCAGACGTGTCACCGGCCTC
Internal bar code:ATTTTTCGCTCTAGGATATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGTCCCGACGTAGAGC
Suggested primer 2:TTGCTGCTGCTACTGCTGTT