Insertion junction: LMJ.RY0402.051601_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.051601
Chromosome:chromosome 8
Location:3634601
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g376300 LIL5, SEP2 Stress Enhanced Protein 2; (1 of 45) IPR023329 - Chlorophyll a/b binding protein domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATACCAAGCACCGTACTGCCTTCAAGTC
Internal bar code:TGACCACCCAGAGTGTCTAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:149
LEAP-Seq percent confirming:99.8433
LEAP-Seq n confirming:637
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCAGATAGGCAGGTTCG
Suggested primer 2:AGGGTCAAGGGTCAAGTGTG