Insertion junction: LMJ.RY0402.051790_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.051790
Chromosome:chromosome 14
Location:1226216
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre14.g616250 PCD4,CPL9 Conserved in the Plant Lineage; (1 of 1) PTHR33824//PTHR33824:SF3 - FAMILY NOT NAMED // POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGAAAAGGCACGACAGGCAGGGTGTGG
Internal bar code:TGGTAGTCCGAAGCTCGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:368
LEAP-Seq percent confirming:97.7939
LEAP-Seq n confirming:3502
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGGAGTTGGTTTCCAC
Suggested primer 2:GTGTTGGTGTGCATTTCCTG