Insertion junction: LMJ.RY0402.051826_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.051826
Chromosome:chromosome 12
Location:4483752
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g521700 SSS6,SSS1A Soluble starch synthase IA; (1 of 5) K00703 - starch synthase (E2.4.1.21, glgA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAATCACCACAGCCCTGACCGACAATCA
Internal bar code:GGGAAGGCCGAGTTGGAGCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:99.1995
LEAP-Seq n confirming:1611
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTACACGCTGTACGAC
Suggested primer 2:TTCCTTACGGGATTGGTTCA