Insertion junction: LMJ.RY0402.051877_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.051877
Chromosome:chromosome 6
Location:1711175
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g261450 High mobility group protein; (1 of 1) K10802 - high mobility group protein B1 (HMGB1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGACGATGATGGTGATGACGATGAGTAA
Internal bar code:AGGCGGCACCACATCTGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:99.0448
LEAP-Seq n confirming:1659
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGTTGCACTGGGTTTG
Suggested primer 2:CACATGGTGGTCTGTCAAGG