Insertion junction: LMJ.RY0402.051877_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.051877
Chromosome:chromosome 6
Location:1711187
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g261450 High mobility group protein; (1 of 1) K10802 - high mobility group protein B1 (HMGB1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATCGTCATCGGCCTCAGGCTCGTCCTC
Internal bar code:TAGCAGCGGTACACAACCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:967
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATGTTGCACTGGGTTTG
Suggested primer 2:CACATGGTGGTCTGTCAAGG