Insertion junction: LMJ.RY0402.052225_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.052225
Chromosome:chromosome 9
Location:2393899
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391753 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAAGTGCTGATCGGGAGAAAGGTATAT
Internal bar code:GTCGCCTTGAATCACTGAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:99.7334
LEAP-Seq n confirming:9727
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATACAACGGAACGCACA
Suggested primer 2:TCAGCTGCAGCAGGTACAAC