Insertion junction: LMJ.RY0402.052298_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052298
Chromosome:chromosome 7
Location:3684657
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g337516 CGL75,SMM27 (1 of 1) PTHR18895//PTHR18895:SF74 - METHYLTRANSFERASE // HEMK METHYLTRANSFERASE FAMILY MEMBER 1; Conserved in the green lineage 75 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCGGCGGCATCCCTGTGTGGCCCAAC
Internal bar code:GCGGGGCCCGAGATCCGCTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:99.3118
LEAP-Seq n confirming:7937
LEAP-Seq n nonconfirming:55
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGATGCAGGTGTTGATGG
Suggested primer 2:TCGGTGACTCTGCTCATTTG