Insertion junction: LMJ.RY0402.052301_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.052301
Chromosome:chromosome 3
Location:6184268
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g192250 PHC69 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 69 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGGCGATGCTGTAAAAGGCAGTGCCGCG
Internal bar code:CATCTCCCTGATACGCATAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:573
LEAP-Seq percent confirming:99.5542
LEAP-Seq n confirming:670
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTAGCGGTCAAACCAAT
Suggested primer 2:AGCGTCTGTAACCTCTCGGA