Insertion junction: LMJ.RY0402.052388_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.052388
Chromosome:chromosome 1
Location:7524005
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g054150 NTRC1,NTR4 (1 of 1) PTHR10438//PTHR22912//PTHR22912:SF48 - THIOREDOXIN // DISULFIDE OXIDOREDUCTASE // NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3; NADPH-dependent thioredoxin reductase C, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGACAACCTTTCAGCAGCCTGCCATG
Internal bar code:ACTGCCCCAACACGGGGTTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:99.2064
LEAP-Seq n confirming:250
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTCACTCCGCCTTTAG
Suggested primer 2:TTTAAGGAATTCGGCCACTG