Insertion junction: LMJ.RY0402.052438_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052438
Chromosome:chromosome 7
Location:4682878
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g344702 (1 of 24) IPR006553 - Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGTTGTTGTGCAGGCCTGCGAAGTACA
Internal bar code:CCCTACCAACGGATGATGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:87.5184
LEAP-Seq n confirming:596
LEAP-Seq n nonconfirming:85
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTACCGGTACTGCTTC
Suggested primer 2:CGGCTTTCAAGAGTTTCAGG