Insertion junction: LMJ.RY0402.052588_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.052588
Chromosome:chromosome 17
Location:5574820
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g737650 SOM6 (1 of 1) IPR000104//IPR007213//IPR011610//IPR029063 - Antifreeze protein, type I // Leucine carboxyl methyltransferase // S-adenosyl-L-methionine-dependent methyltransferase, putative // S-adenosyl-L-methionine-dependent methyltransferase; S-adenosyl-L-methionine-dependent O-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAATTGATTGGAGCGGCACGACGTACGT
Internal bar code:CGTATGCTTTATCGATGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:99.8258
LEAP-Seq n confirming:2292
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGATAACATGCGGAAGTGGG
Suggested primer 2:GGACTGACAGGAGGGAATGA