Insertion junction: LMJ.RY0402.052601_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052601
Chromosome:chromosome 9
Location:2524328
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g390957 (1 of 6) IPR001471//IPR016177 - AP2/ERF domain // DNA-binding domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGGGGCGGCACTCTCTGTTCAAGGGCG
Internal bar code:GGCGTGGACATAGGAACGCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:433
LEAP-Seq percent confirming:99.4264
LEAP-Seq n confirming:520
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCATACATGCGCGAGTC
Suggested primer 2:GTATCTAGCTGCTCACCCGC