Insertion junction: LMJ.RY0402.052718_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.052718
Chromosome:chromosome 3
Location:9042343
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGATGAAGCAAAAGTATGCGGCTAAAC
Internal bar code:CTGGGTCATCCACCCCACGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:555
LEAP-Seq percent confirming:99.5637
LEAP-Seq n confirming:4792
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGTTCCTGATCGTTTG
Suggested primer 2:GACGTTTCACTGACGAGGGT