Insertion junction: LMJ.RY0402.052718_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052718
Chromosome:chromosome 3
Location:9042348
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACATAACGCGCGTGCCTACAAATCCT
Internal bar code:GAGACTGACTTCCACGGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:97.8238
LEAP-Seq n confirming:2787
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGTTCCTGATCGTTTG
Suggested primer 2:GACGTTTCACTGACGAGGGT