Insertion junction: LMJ.RY0402.052748_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.052748
Chromosome:chromosome 3
Location:5376526
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCTGCCAAGCAACCCGGACCTGTGCGT
Internal bar code:GTTAGATCCATTGTGTATGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:99.7695
LEAP-Seq n confirming:7790
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAGAAGCCGTCAGGAAC
Suggested primer 2:GGTAGGGTAGGAGGGTAGCG