Insertion junction: LMJ.RY0402.052748_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052748
Chromosome:chromosome 3
Location:5376536
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g184500 (1 of 2) PTHR33925:SF3 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATAGGTATGCAGGTTGCAGGTGCGGTAA
Internal bar code:GTCGGCTTTACGGGAGGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:99.1443
LEAP-Seq n confirming:1738
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCAGAAGCCGTCAGGAAC
Suggested primer 2:GGTAGGGTAGGAGGGTAGCG