Insertion junction: LMJ.RY0402.052958_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.052958
Chromosome:chromosome 11
Location:332517
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467568 (1 of 1) K06276 - 3-phosphoinositide dependent protein kinase-1 (PDPK1) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCTGCGGCAAGTCCCACGGCCGAACAA
Internal bar code:TTGAGGTTCAGGGCCGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:805
LEAP-Seq percent confirming:99.1334
LEAP-Seq n confirming:2288
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTCCCAGACCATAGCA
Suggested primer 2:GGGCGCTCACATGAATCTAT