Insertion junction: LMJ.RY0402.052967_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.052967
Chromosome:chromosome 3
Location:5671909
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g187550 (1 of 1) PF04858 - TH1 protein (TH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAGAAGTGAAGGCGTAGGGAGGGGGGG
Internal bar code:TAATTCACGAACCTATGGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:89.0228
LEAP-Seq n confirming:8199
LEAP-Seq n nonconfirming:1011
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTATGTGACTGGCGCT
Suggested primer 2:TTCCCTACGTCCAAGTCCAC