Insertion junction: LMJ.RY0402.052973_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.052973
Chromosome:chromosome 4
Location:374834
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g217914 WDR65,FAP57,BOP2 (1 of 1) IPR001680//IPR011047//IPR015943//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain; Flagellar Associated Protein 57 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGGCTCGGCGACGGGTTCTTGGTAGTG
Internal bar code:AGGCACTACCGGCGCGGCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:1.96711
LEAP-Seq n confirming:183
LEAP-Seq n nonconfirming:9120
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTGTGCATGAAAGGAC
Suggested primer 2:CTAGGTGCCATGCTTCCTTC