Insertion junction: LMJ.RY0402.053000_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.053000
Chromosome:chromosome 12
Location:1819359
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGCAAACAGAAGCGCTGCAAGGAGAAG
Internal bar code:TACGTACGTCCTAATCCTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:270
LEAP-Seq percent confirming:99.1758
LEAP-Seq n confirming:361
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTTAAAGCTCGGCTGTC
Suggested primer 2:GAAGGCATGGAAGCACTAGC