Insertion junction: LMJ.RY0402.053099_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.053099
Chromosome:chromosome 16
Location:6224451
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACCGTTGGGTAAAAAGTCGGGTGTCC
Internal bar code:CAGTGATGACGATGGTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1050
LEAP-Seq percent confirming:99.0607
LEAP-Seq n confirming:8015
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATATCGATCCTTCCCGCTA
Suggested primer 2:ACTTCCAGCCTGGTTACCCT