Insertion junction: LMJ.RY0402.053117_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.053117
Chromosome:chromosome 3
Location:1281959
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g150251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACACGGCCTTGCAAGCGTGATCTCAACC
Internal bar code:TGGGGGTTCCGCACCTGCCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1056
LEAP-Seq percent confirming:91.5037
LEAP-Seq n confirming:6505
LEAP-Seq n nonconfirming:604
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGCTACGGCTTCTCACC
Suggested primer 2:GTGTGTCAACAACACCCTGC