Insertion junction: LMJ.RY0402.053138_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053138
Chromosome:chromosome 5
Location:3177361
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGGCGCCGCCGACCCCTGGCCGACCT
Internal bar code:AAGGGGCTCGGCTAGCCCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:98.9106
LEAP-Seq n confirming:2633
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGGTTGTTTTGGGCTA
Suggested primer 2:TGTGACGCAGACCGTTATGT