Insertion junction: LMJ.RY0402.053346_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053346
Chromosome:chromosome 1
Location:5979516
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g042450 (1 of 14) IPR006626//IPR011050 - Parallel beta-helix repeat // Pectin lyase fold/virulence factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGTGGCAATGCCGTACCATCACCTGTA
Internal bar code:GCTACACCCGATGGAGGTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:844
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGATTAGCTGCCTGACC
Suggested primer 2:CTTCTTGATTTCCTCTGCGG