Insertion junction: LMJ.RY0402.053370_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.053370
Chromosome:chromosome 17
Location:3662515
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g726600 5'UTR|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCGCCATTAAATTTTGATAGCGTTT
Internal bar code:TCTTTCGGATTTCAAACATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:98.8235
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGTCAGCAGGGAGCACT
Suggested primer 2:GTTTCTCCACCAGCTTCCAG