Insertion junction: LMJ.RY0402.053500_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053500
Chromosome:chromosome 12
Location:4858501
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g525050 SMC6A (1 of 2) PTHR19306//PTHR19306:SF6 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // PROTEIN C23H4.6, ISOFORM A-RELATED; Structural Maintenance of Chromosomes protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGTGAAGGTACGGCGGTACGGAGGCAG
Internal bar code:GGCTAATAGGGTTTGACACGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:899
LEAP-Seq percent confirming:81.1549
LEAP-Seq n confirming:1813
LEAP-Seq n nonconfirming:421
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCACCAGAATAAGAGCC
Suggested primer 2:GTTTCGTGGGAACGAACAAT