Insertion junction: LMJ.RY0402.053751_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053751
Chromosome:chromosome 12
Location:3933385
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g516300 CGL154 Conserved in the Green Lineage; (1 of 11) PF13229 - Right handed beta helix region (Beta_helix) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGAAGTGCGCGGTACGAAAGCTCACA
Internal bar code:AGACAGGGGAGTGTGTGCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:786
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGCTTGTCGTTTCTCTT
Suggested primer 2:ACGATAGCACCCATCCACTC