Insertion junction: LMJ.RY0402.053804_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053804
Chromosome:chromosome_17
Location:3899260
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre17.g728300 FAP226,CAL6 Calpain cysteine protease and Flagellar Associated Protein antisense intron

Insertion site details

Flanking sequence (orientation from cassette outwards):AACGCCTCTGCCTGTGCTCCGCTCGTCTTC
Internal bar code:TAACCTGACCTTAGATACGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:569
LEAP-Seq percent confirming:99.5652
LEAP-Seq n confirming:1374
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGAACAGGCAGAACAGC
Suggested primer 2:GCAAATACCAGCCCGAACTA