Insertion junction: LMJ.RY0402.053826_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.053826
Chromosome:chromosome 1
Location:5932979
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g042300 SRR6 (1 of 1) IPR001190//IPR009003//IPR017448 - SRCR domain // Peptidase S1, PA clan // SRCR-like domain; Scavenger receptor cysteine rich (SRCR) protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCATGACAAGACGCTACCTGGCACTGG
Internal bar code:CGTGACCATAAATTAGTGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:98.6947
LEAP-Seq n confirming:3478
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCTATCTAGCAGTCGC
Suggested primer 2:AGGACAGGATAGCTGCAGGA