Insertion junction: LMJ.RY0402.053893_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.053893
Chromosome:chromosome 10
Location:3700760
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g446100 TRX6,TRXY,TRXY1 Thioredoxin y, chloroplastic; (1 of 1) PTHR10438:SF280 - THIOREDOXIN Y1, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGTGCGCATGGGACAATGTACTTGACG
Internal bar code:ATGGAGGGCCGCGCACCCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCACACTAGAAGGCTCAG
Suggested primer 2:TGAGTGTGGAGTGGAACCAA