Insertion junction: LMJ.RY0402.054049_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.054049
Chromosome:chromosome 7
Location:3885528
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g339000 CrRbcXIIb,RBCX2B RuBisCO chaperone; (1 of 2) PTHR33791//PTHR33791:SF1 - FAMILY NOT NAMED // CHAPERONIN-LIKE RBCX PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCGCATGCTGCGGCCCACCCAGCCACGC
Internal bar code:TTCGGGGCGGTAATGAAACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:968
LEAP-Seq percent confirming:47.3611
LEAP-Seq n confirming:22138
LEAP-Seq n nonconfirming:24605
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGCTGCCTCTGTTGTC
Suggested primer 2:GGGTTGCGTTTCCAATATGT