Insertion junction: LMJ.RY0402.054196_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.054196
Chromosome:chromosome 13
Location:2506382
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g580300 CGLD4,ABC3 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR12847//PTHR12847:SF6 - ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED // ABC TRANSPORTER I FAMILY MEMBER 19-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCCTAGCCCTCACTCCTCAGCGCTCCTC
Internal bar code:GGTCGGAGTGGGAAACGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCCTCTTGAGTCCGAGC
Suggested primer 2:TAGTGACAGAATGGGGCACA