Insertion junction: LMJ.RY0402.054236_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.054236
Chromosome:chromosome 4
Location:1251487
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g215150 SSS1B,SSS1,SSIb (1 of 1) IPR023159 - SO1590-like domain; Soluble starch synthase IB intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGTGACGACTGCGCTGCGGAAGTACCA
Internal bar code:TCAGCTCGGTGAGGCTCTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:477
LEAP-Seq percent confirming:11.8066
LEAP-Seq n confirming:464
LEAP-Seq n nonconfirming:3466
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGCATCAAAGCTCACTG
Suggested primer 2:GATGATGGGAAGTTAGGGCA