Insertion junction: LMJ.RY0402.054330_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.054330
Chromosome:chromosome 2
Location:4158603
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g098200 CGL103,PRT1 (1 of 1) PF00569//PF13920 - Zinc finger, ZZ type (ZZ) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCCCGCCACCCATCCATCCACACAA
Internal bar code:AGTAGTGGGTTAACCGATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:80.41
LEAP-Seq n confirming:353
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAAGCAAATAGGCTGCGG
Suggested primer 2:GTACAGGTGGGTGACAGCCT