Insertion junction: LMJ.RY0402.054351_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.054351
Chromosome:chromosome 9
Location:2451642
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391370 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTTGCGAAGATTCCTTGGGTTGGCATTC
Internal bar code:TCTCCCCCCGCGGACTCTTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:99.5856
LEAP-Seq n confirming:2403
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGATCAAACAGCAGGGTT
Suggested primer 2:TCTGCAGTGTAGTGCCCTTG