Insertion junction: LMJ.RY0402.054432_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.054432
Chromosome:chromosome 13
Location:3916194
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGTACTTTGGGGCGGGTCCCCAGTGCC
Internal bar code:TAACGGGTGGATGTGTCCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:834
LEAP-Seq percent confirming:99.793
LEAP-Seq n confirming:2892
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGCCTACACACACGGTGA
Suggested primer 2:ACACACACACACACACACGG