Insertion junction: LMJ.RY0402.054433_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.054433
Chromosome:chromosome 6
Location:5628261
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g285900 FAP396 (1 of 2) IPR000104//IPR003590 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype; Flagellar Associated Protein 396 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGCCCGAGCCCAGTGGAGCAGGGCAC
Internal bar code:GAACGGGTGTGGTGGGGTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:285
LEAP-Seq percent confirming:99.4094
LEAP-Seq n confirming:505
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAAAATGGTGGGTATCG
Suggested primer 2:GAGGGCTTCCAGTGTTGTTC