Insertion junction: LMJ.RY0402.054502_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.054502
Chromosome:chromosome 2
Location:6201583
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g113850 PBGD2,HMBS,HEM3 (1 of 1) PTHR11557//PTHR11557:SF0 - PORPHOBILINOGEN DEAMINASE // PORPHOBILINOGEN DEAMINASE; Porphobilinogen deaminase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTACTGCTCGTGCTGGTGCTGGTGCT
Internal bar code:TAAAACCAAGAGATATGTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:836
LEAP-Seq percent confirming:99.2173
LEAP-Seq n confirming:15211
LEAP-Seq n nonconfirming:120
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCGTGTTTAGGGGCAC
Suggested primer 2:GCACACACACACACCCCTAC