Insertion junction: LMJ.RY0402.054584_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.054584
Chromosome:chromosome 9
Location:4009968
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g392914 5'UTR|outside_mRNA
Cre09.g392951 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTGAGTCGCCCGCGTTTGAAGGCACCG
Internal bar code:GGCTTGTACTCGACGGATTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:37.3906
LEAP-Seq n confirming:1410
LEAP-Seq n nonconfirming:2361
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGACTTAGATGGGCCAAACA
Suggested primer 2:TGAGGCACATACAGCGACTC