Insertion junction: LMJ.RY0402.054696_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.054696
Chromosome:chromosome_3
Location:3987130
Confidence (%):73
Locus systematic id Locus common name Defline Orientation Feature
Cre03.g171900 FAP56 Flagellar Associated Protein sense 5'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):CTCTCGTCGCCCGCAAAGCTGAACTAAGCC
Internal bar code:GGGGCTGATTGAATAGTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:609
LEAP-Seq percent confirming:99.5524
LEAP-Seq n confirming:1557
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACACGGTGCCTAGAAT
Suggested primer 2:ACTTGTAGAACGCAATGGGG