Insertion junction: LMJ.RY0402.054727_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.054727
Chromosome:chromosome 12
Location:6064723
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCACAATGGCCGCACGCGCGTGAGCAC
Internal bar code:GCGGGGTCATACGAGGACATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:89.3501
LEAP-Seq n confirming:2626
LEAP-Seq n nonconfirming:313
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCGGAACCACACTCAAAAGT
Suggested primer 2:GTACACCACACAGGGCACAG