Insertion junction: LMJ.RY0402.054849_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.054849
Chromosome:chromosome 5
Location:2206256
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre05.g234653 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTTCTCGTATTTCAAATATGCTAAGA
Internal bar code:CTTTGGGCGCTCGAGGACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:453
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTACTGCTGAAACCAAC
Suggested primer 2:GCGGAACTAGGTGTGGATGT