Insertion junction: LMJ.RY0402.054861_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.054861
Chromosome:chromosome 3
Location:1732607
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g153600 (1 of 1) IPR000104//IPR003034//IPR022656 - Antifreeze protein, type I // SAP domain // XPA C- terminal intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGCGCGCGATCGAGGCAAGGTCGAACG
Internal bar code:CCCTTGCCGGAGTAGTAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:99.4688
LEAP-Seq n confirming:749
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCCTCTTCCTCTGCCT
Suggested primer 2:ACAAAAGAGCGGAATGATGG