Insertion junction: LMJ.RY0402.055027_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055027
Chromosome:chromosome 8
Location:1169380
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTGAAAGGAACTCTTGCCTGTGTGGCC
Internal bar code:TCTGGAGCGGATAGAAGCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:309
LEAP-Seq percent confirming:99.6845
LEAP-Seq n confirming:2528
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACACACCCTGCTATGC
Suggested primer 2:ACCGGCACATCCAGTAACTC