Insertion junction: LMJ.RY0402.055057_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055057
Chromosome:chromosome 17
Location:3177099
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g721850 SSA16 cilia-sensing, structure and/or assembly; (1 of 1) K08292 - elongation factor 2 kinase (EEF2K) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTTCGCCCGAGATCGTGACAGTTAAGTA
Internal bar code:AGTTATGGTACAAAGTTTCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:971
LEAP-Seq percent confirming:98.4711
LEAP-Seq n confirming:5990
LEAP-Seq n nonconfirming:93
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTATGCGACCTTCCCTGT
Suggested primer 2:AAAACGACCTGTATGCCTGG