Insertion junction: LMJ.RY0402.055094_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055094
Chromosome:chromosome 5
Location:867204
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g247650 (1 of 32) IPR000536 - Nuclear hormone receptor, ligand-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTCGCAGCAGCCCCACCACTTTCAGCA
Internal bar code:TAGGAAGGCAAGAGGCAGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:61.1888
LEAP-Seq n confirming:2100
LEAP-Seq n nonconfirming:1332
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTGCATGTGTGTACCG
Suggested primer 2:AGCCATGTACCGTTACGGAG