Insertion junction: LMJ.RY0402.055136_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.055136
Chromosome:chromosome 17
Location:3290595
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g723100 (1 of 10) PTHR31867:SF1 - EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGACAGGCATGCGTGCGTGCCGAATGCGT
Internal bar code:ATGGCGGGCACGGGGCGCGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:798
LEAP-Seq percent confirming:99.0338
LEAP-Seq n confirming:1230
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TATTTTGCTTTACGACCGGG
Suggested primer 2:GCAAATAAGGAGAGCGCAAC