Insertion junction: LMJ.RY0402.055183_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.055183
Chromosome:chromosome 1
Location:2649075
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCTCCTCCCAGACCGGGTTCTTGCCGC
Internal bar code:CTTTTTGAGGATGGTGTTTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:887
LEAP-Seq percent confirming:99.684
LEAP-Seq n confirming:631
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAGCGCTTTTGGTGACCT
Suggested primer 2:GCAAGACTCTTCCATCTGCC